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Basic information
Operon ID 3112
Size 4
Protein gene number 4
RNA gene number 0
Similar operon number 22
Species nameEscherichia coli str. K-12 substr. MG1655
NC name NC_000913
NC descriptionEscherichia coli str. K-12 substr. MG1655 chromosome, complete genome.
Reference No available reference
Genes
GIStartEndStrand GeneSynonymCOGProduct
16128515 558197 558889 + sfmC b0531 - pilin chaperone, periplasmic
16128516 558920 561523 + sfmD b0532 - predicted outer membrane export usher protein
145698227 561559 562542 + sfmH b0533 - predicted fimbrial-like adhesin protein
16128518 562553 563068 + sfmF b0534 - predicted fimbrial-like adhesin protein
Terminator

TU (transcription unit)

Source ID Genes Start End Strand Accuracy
SRR441582 432943 (TU0297) b0531(sfmC) 558197 558889 + 0.77
SRR441580 424039 (TU0325) b0531(sfmC) 558197 558889 + 0.95
SRR441581 335380 (TU0324) b0531(sfmC) b0530(sfmA) 557435 558889 + 0.83
SRR546802 326018 (TU0303) b0531(sfmC) 558197 558889 + 0.88
SRR546800 318033 (TU0279) b0526(cysS) b0527(ybcI) b0529(folD) b0531(sfmC) b0532(sfmD) b0528(ybcJ) b0530(sfmA) 553834 561523 + 0.91
SRR546799 315496 (TU0295) b0526(cysS) b0527(ybcI) b0529(folD) b0531(sfmC) b0528(ybcJ) b0530(sfmA) 553834 558889 + 0.97
SRR609955 301901 (TU0204) b0533(sfmH) b0531(sfmC) b0532(sfmD) b0534(sfmF) b0530(sfmA) 557435 563068 + 0.98
SRR441587 299101 (TU0358) b0526(cysS) b0527(ybcI) b0529(folD) b0531(sfmC) b0528(ybcJ) b0530(sfmA) 553834 558889 + 0.85
SRR441586 296163 (TU0338) b0531(sfmC) 558197 558889 + 0.85
SRR609954 294305 (TU0204) b0531(sfmC) 558197 558889 + 0.80
SRR609953 291977 (TU0303) b0531(sfmC) 558197 558889 + 0.93
SRR609952 289467 (TU0294) b0531(sfmC) 558197 558889 + 1.00
SRR546814 286953 (TU0298) b0531(sfmC) 558197 558889 + 0.86
SRR546813 284325 (TU0296) b0531(sfmC) 558197 558889 + 0.90
SRR441585 282008 (TU0261) b0531(sfmC) 558197 558889 + 0.84
SRR441584 279111 (TU0344) b0531(sfmC) 558197 558889 + 0.93
SRR546812 276400 (TU0349) b0531(sfmC) 558197 558889 + 0.84
SRR546811 273645 (TU0315) b0531(sfmC) 558197 558889 + 0.83
SRR546811 273643 (TU0313) b0533(sfmH) b0529(folD) b0531(sfmC) b0532(sfmD) b0534(sfmF) b0535(fimZ) b0537(intD) b0528(ybcJ) b0530(sfmA) 555884 565302 - 1.00
SRR546810 271314 (TU0269) b0526(cysS) b0527(ybcI) b0529(folD) b0531(sfmC) b0532(sfmD) b0528(ybcJ) b0530(sfmA) 553834 561523 + 0.91
SRR546809 269409 (TU0203) b0533(sfmH) b0527(ybcI) b0529(folD) b0531(sfmC) b0532(sfmD) b0534(sfmF) b0535(fimZ) b0537(intD) b0528(ybcJ) b0530(sfmA) 555255 565302 - 0.98
SRR546809 269406 (TU0200) b0533(sfmH) b0520(ylbF) b0521(ybcF) b0522(purK) b0523(purE) b0524(lpxH) b0525(ppiB) b0526(cysS) b0527(ybcI) b0529(folD) b0531(sfmC) b0532(sfmD) b0534(sfmF) b0528(ybcJ) b0530(sfmA) 548850 563068 + 0.90
SRR546808 267043 (TU0280) b0533(sfmH) b0531(sfmC) b0532(sfmD) 558197 562542 + 0.89
SRR441583 264704 (TU0264) b0531(sfmC) 558197 558889 + 1.00
SRR546807 262585 (TU0258) b0533(sfmH) b0531(sfmC) b0532(sfmD) b0534(sfmF) b0535(fimZ) 558197 564022 + 0.99
SRR546807 262583 (TU0256) b0533(sfmH) b0529(folD) b0531(sfmC) b0532(sfmD) b0534(sfmF) b0535(fimZ) b0537(intD) b0528(ybcJ) b0530(sfmA) 555884 565302 - 0.93
SRR546806 259992 (TU0295) b0531(sfmC) b0530(sfmA) 557435 558889 + 0.85
SRR546805 257544 (TU0282) b0531(sfmC) 558197 558889 + 0.92
SRR546804 254906 (TU0309) b0531(sfmC) 558197 558889 + 0.84
SRR546803 252511 (TU0279) b0531(sfmC) 558197 558889 + 0.95
SRR546801 249847 (TU0307) b0531(sfmC) 558197 558889 + 0.78
SRR441582 432944 (TU0298) b0532(sfmD) 558920 561523 + 1.00
SRR441580 424040 (TU0326) b0532(sfmD) 558920 561523 + 1.00
SRR441581 335381 (TU0325) b0532(sfmD) 558920 561523 + 0.97
SRR546802 326019 (TU0304) b0532(sfmD) 558920 561523 + 1.00
SRR546799 315499 (TU0298) b0532(sfmD) 558920 561523 + 1.00
SRR441587 299104 (TU0361) b0532(sfmD) 558920 561523 + 1.00
SRR441586 296164 (TU0339) b0532(sfmD) 558920 561523 + 1.00
SRR609954 294306 (TU0205) b0533(sfmH) b0532(sfmD) b0534(sfmF) 558920 563068 + 0.95
SRR609953 291978 (TU0304) b0532(sfmD) 558920 561523 + 1.00
SRR609952 289468 (TU0295) b0532(sfmD) 558920 561523 + 1.00
SRR546814 286954 (TU0299) b0532(sfmD) 558920 561523 + 1.00
SRR546813 284326 (TU0297) b0532(sfmD) 558920 561523 + 1.00
SRR441585 282009 (TU0262) b0532(sfmD) 558920 561523 + 1.00
SRR441584 279112 (TU0345) b0532(sfmD) 558920 561523 + 1.00
SRR546812 276401 (TU0350) b0532(sfmD) 558920 561523 + 1.00
SRR546811 273646 (TU0316) b0532(sfmD) 558920 561523 + 1.00
SRR441583 264705 (TU0265) b0532(sfmD) 558920 561523 + 1.00
SRR546806 259993 (TU0296) b0532(sfmD) 558920 561523 + 1.00
SRR546805 257545 (TU0283) b0532(sfmD) 558920 561523 + 1.00
SRR546804 254907 (TU0310) b0532(sfmD) 558920 561523 + 1.00
SRR546803 252512 (TU0280) b0532(sfmD) 558920 561523 + 1.00
SRR546801 249848 (TU0308) b0532(sfmD) 558920 561523 + 1.00
SRR441582 432945 (TU0299) b0533(sfmH) 561559 562542 + 1.00
SRR441580 424041 (TU0327) b0533(sfmH) 561559 562542 + 1.00
SRR441581 335382 (TU0326) b0533(sfmH) 561559 562542 + 0.97
SRR546802 326020 (TU0305) b0533(sfmH) 561559 562542 + 1.00
SRR546800 318036 (TU0282) b0533(sfmH) 561559 562542 + 1.00
SRR546799 315500 (TU0299) b0533(sfmH) 561559 562542 + 1.00
SRR441587 299105 (TU0362) b0533(sfmH) 561559 562542 + 1.00
SRR441586 296165 (TU0340) b0533(sfmH) 561559 562542 + 1.00
SRR609953 291979 (TU0305) b0533(sfmH) 561559 562542 + 1.00
SRR609952 289469 (TU0296) b0533(sfmH) 561559 562542 + 1.00
SRR546814 286955 (TU0300) b0533(sfmH) 561559 562542 + 1.00
SRR546813 284327 (TU0298) b0533(sfmH) 561559 562542 + 1.00
SRR441585 282010 (TU0263) b0533(sfmH) 561559 562542 + 1.00
SRR441584 279113 (TU0346) b0533(sfmH) 561559 562542 + 1.00
SRR546812 276402 (TU0351) b0533(sfmH) 561559 562542 + 1.00
SRR546811 273647 (TU0317) b0533(sfmH) 561559 562542 + 1.00
SRR546810 271317 (TU0272) b0533(sfmH) 561559 562542 + 1.00
SRR441583 264706 (TU0266) b0533(sfmH) 561559 562542 + 1.00
SRR546806 259994 (TU0297) b0533(sfmH) 561559 562542 + 1.00
SRR546805 257546 (TU0284) b0533(sfmH) 561559 562542 + 1.00
SRR546804 254908 (TU0311) b0533(sfmH) 561559 562542 + 1.00
SRR546803 252513 (TU0281) b0533(sfmH) 561559 562542 + 1.00
SRR546801 249849 (TU0309) b0533(sfmH) 561559 562542 + 1.00
SRR441582 432946 (TU0300) b0534(sfmF) 562553 563068 + 1.00
SRR441580 424042 (TU0328) b0534(sfmF) 562553 563068 + 1.00
SRR441581 335383 (TU0327) b0534(sfmF) 562553 563068 + 0.98
SRR546802 326021 (TU0306) b0534(sfmF) 562553 563068 + 1.00
SRR546800 318037 (TU0283) b0534(sfmF) 562553 563068 + 1.00
SRR546799 315501 (TU0300) b0534(sfmF) 562553 563068 + 1.00
SRR441587 299106 (TU0363) b0534(sfmF) b0535(fimZ) b0537(intD) 562553 565910 + 0.83
SRR441586 296166 (TU0341) b0534(sfmF) 562553 563068 + 1.00
SRR609953 291980 (TU0306) b0534(sfmF) 562553 563068 + 1.00
SRR609952 289470 (TU0297) b0534(sfmF) 562553 563068 + 1.00
SRR546814 286956 (TU0301) b0534(sfmF) 562553 563068 + 1.00
SRR546813 284328 (TU0299) b0534(sfmF) 562553 563068 + 1.00
SRR441585 282011 (TU0264) b0534(sfmF) 562553 563068 + 1.00
SRR441584 279114 (TU0347) b0534(sfmF) 562553 563068 + 1.00
SRR546812 276403 (TU0352) b0534(sfmF) 562553 563068 + 1.00
SRR546811 273648 (TU0318) b0534(sfmF) 562553 563068 + 1.00
SRR546810 271318 (TU0273) b0534(sfmF) 562553 563068 + 1.00
SRR546808 267044 (TU0281) b0534(sfmF) b0535(fimZ) 562553 564022 + 0.85
SRR441583 264707 (TU0267) b0534(sfmF) 562553 563068 + 1.00
SRR546806 259995 (TU0298) b0534(sfmF) 562553 563068 + 1.00
SRR546805 257547 (TU0285) b0534(sfmF) 562553 563068 + 1.00
SRR546804 254909 (TU0312) b0534(sfmF) 562553 563068 + 1.00
SRR546803 252514 (TU0282) b0534(sfmF) 562553 563068 + 1.00
SRR546801 249850 (TU0310) b0534(sfmF) b0535(fimZ) b0537(intD) 562553 565910 + 0.78

Conserve operons

Operon Size Similarity Species NC
3112 4 1 Escherichia coli str. K-12 substr. MG1655 NC_000913
296350 4 1 Enterobacter sp. 638 NC_009436
351047 4 1 Citrobacter koseri ATCC BAA-895 NC_009792
351703 5 0.8 Escherichia coli HS NC_009800
400378 4 1 Escherichia coli ATCC 8739 NC_010468
401127 4 1 Escherichia coli str. K-12 substr. DH10B NC_010473
495111 4 1 Escherichia coli IAI1 NC_011741
498235 4 1 Escherichia coli 55989 NC_011748
499232 3 0.75 Escherichia coli IAI39 NC_011750
566435 4 1 Escherichia coli BW2952 NC_012759
580638 4 1 Escherichia coli BL21(DE3) NC_012892
588419 4 1 Escherichia coli 'BL21-Gold(DE3)pLysS AG' NC_012947
590345 4 1 Escherichia coli BL21(DE3) NC_012971
695423 5 0.8 Enterobacter cloacae subsp. cloacae ATCC 13047 NC_014121
756117 5 0.8 Enterobacter cloacae SCF1 NC_014618
762436 3 0.75 Achromobacter xylosoxidans A8 NC_014640
919227 5 0.8 Enterobacter asburiae LF7a NC_015968
1074281 4 1 Escherichia coli DH1 NC_017625
15210 4 1 Escherichia coli O157:H7 str. EDL933 NC_002655
19123 4 1 Escherichia coli O157:H7 str. Sakai NC_002695
46341 4 1 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 NC_003197
47219 4 1 Salmonella enterica subsp. enterica serovar Typhi str. CT18 NC_003198
80117 4 1 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 NC_004631