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Basic information
Operon ID 3115
Size 6
Protein gene number 6
RNA gene number 0
Similar operon number 5
Species nameEscherichia coli str. K-12 substr. MG1655
NC name NC_000913
NC descriptionEscherichia coli str. K-12 substr. MG1655 chromosome, complete genome.
Reference PubMed: 19881496
Genes
GIStartEndStrand GeneSynonymCOGProduct
145698228 571591 571692 + ylcH b4588 - hypothetical protein, DLP12 prophage
16128530 571689 572144 + ybcN b0547 - DLP12 prophage; predicted protein
16128531 572144 572314 + ninE b0548 - DLP12 prophage; conserved protein
16128532 572307 572597 + ybcO b0549 - DLP12 prophage; predicted protein
16128533 572594 572956 + rusA b0550 - DLP12 prophage; endonuclease RUS
94541097 572953 573093 + ylcG b4509 - expressed protein, DLP12 prophage
Terminator

TU (transcription unit)

Source ID Genes Start End Strand Accuracy
SRR441582 432957 (TU0311) b4588(ylcH) 571591 571692 + 1.00
SRR441580 424053 (TU0339) b4588(ylcH) 571591 571692 + 0.98
SRR441581 335396 (TU0340) b4588(ylcH) 571591 571692 + 0.81
SRR546802 326033 (TU0318) b4588(ylcH) 571591 571692 + 1.00
SRR546800 318046 (TU0292) b4588(ylcH) 571591 571692 + 1.00
SRR546799 315512 (TU0311) b4588(ylcH) 571591 571692 + 1.00
SRR609955 301907 (TU0210) b4588(ylcH) b0545(ybcL) b0546(ybcM) b0547(ybcN) b0548(ninE) b0549(ybcO) b0550(rusA) b0551(quuD) b0552(insH) b0554(essD) b0555(rrrD) b4509(ylcG) b4510(rzoD) 570116 577732 + 0.99
SRR441587 299116 (TU0373) b4588(ylcH) 571591 571692 + 0.83
SRR441586 296180 (TU0355) b4588(ylcH) 571591 571692 + 0.90
SRR609954 294310 (TU0209) b4588(ylcH) b0541(insF) b0543(emrE) b0544(ybcK) b0545(ybcL) b0546(ybcM) b0547(ybcN) b0548(ninE) b0549(ybcO) b0550(rusA) b0551(quuD) b0540(insE) b4509(ylcG) 565599 573562 + 0.99
SRR609953 291989 (TU0315) b4588(ylcH) 571591 571692 + 1.00
SRR609952 289479 (TU0306) b4588(ylcH) 571591 571692 + 1.00
SRR546814 286966 (TU0311) b4588(ylcH) 571591 571692 + 1.00
SRR546813 284339 (TU0310) b4588(ylcH) 571591 571692 + 1.00
SRR441585 282018 (TU0271) b4588(ylcH) b0545(ybcL) b0546(ybcM) b0547(ybcN) 570116 572144 + 0.92
SRR441584 279127 (TU0360) b4588(ylcH) 571591 571692 + 0.93
SRR546812 276416 (TU0365) b4588(ylcH) 571591 571692 + 1.00
SRR546811 273657 (TU0327) b4588(ylcH) 571591 571692 + 1.00
SRR546810 271325 (TU0280) b4588(ylcH) 571591 571692 + 1.00
SRR546809 269414 (TU0208) b4588(ylcH) 571591 571692 + 0.76
SRR546808 267054 (TU0291) b4588(ylcH) 571591 571692 + 1.00
SRR441583 264717 (TU0277) b4588(ylcH) 571591 571692 + 1.00
SRR546807 262591 (TU0264) b4588(ylcH) 571591 571692 + 1.00
SRR546806 260009 (TU0312) b4588(ylcH) 571591 571692 + 1.00
SRR546805 257558 (TU0296) b4588(ylcH) 571591 571692 + 1.00
SRR546804 254920 (TU0323) b4588(ylcH) 571591 571692 + 1.00
SRR546803 252526 (TU0294) b4588(ylcH) 571591 571692 + 1.00
SRR546801 249861 (TU0321) b4588(ylcH) 571591 571692 + 0.93
SRR441582 432958 (TU0312) b0547(ybcN) 571689 572144 + 1.00
SRR441580 424054 (TU0340) b0547(ybcN) 571689 572144 + 1.00
SRR441581 335397 (TU0341) b0547(ybcN) 571689 572144 + 1.00
SRR546802 326034 (TU0319) b0547(ybcN) 571689 572144 + 1.00
SRR546800 318047 (TU0293) b0547(ybcN) 571689 572144 + 1.00
SRR546799 315513 (TU0312) b0547(ybcN) 571689 572144 + 1.00
SRR441587 299117 (TU0374) b0547(ybcN) 571689 572144 + 1.00
SRR441586 296181 (TU0356) b0547(ybcN) 571689 572144 + 1.00
SRR609953 291990 (TU0316) b0547(ybcN) 571689 572144 + 0.80
SRR609952 289480 (TU0307) b0547(ybcN) 571689 572144 + 1.00
SRR546814 286967 (TU0312) b0547(ybcN) 571689 572144 + 1.00
SRR546813 284340 (TU0311) b0547(ybcN) 571689 572144 + 1.00
SRR441584 279128 (TU0361) b0547(ybcN) 571689 572144 + 1.00
SRR546812 276417 (TU0366) b0547(ybcN) 571689 572144 + 1.00
SRR546811 273658 (TU0328) b0547(ybcN) 571689 572144 + 1.00
SRR546810 271326 (TU0281) b0547(ybcN) 571689 572144 + 1.00
SRR546809 269415 (TU0209) b0547(ybcN) 571689 572144 + 0.52
SRR546808 267055 (TU0292) b0547(ybcN) 571689 572144 + 1.00
SRR441583 264718 (TU0278) b0547(ybcN) 571689 572144 + 1.00
SRR546807 262592 (TU0265) b0547(ybcN) 571689 572144 + 1.00
SRR546806 260010 (TU0313) b0547(ybcN) 571689 572144 + 1.00
SRR546805 257559 (TU0297) b0547(ybcN) 571689 572144 + 1.00
SRR546804 254921 (TU0324) b0547(ybcN) 571689 572144 + 1.00
SRR546803 252527 (TU0295) b0547(ybcN) 571689 572144 + 1.00
SRR546801 249862 (TU0322) b0547(ybcN) 571689 572144 + 1.00
SRR441582 432959 (TU0313) b0548(ninE) 572144 572314 + 1.00
SRR441580 424055 (TU0341) b0548(ninE) 572144 572314 + 1.00
SRR441581 335398 (TU0342) b0548(ninE) 572144 572314 + 0.98
SRR546802 326035 (TU0320) b0548(ninE) 572144 572314 + 1.00
SRR546800 318048 (TU0294) b0548(ninE) 572144 572314 + 1.00
SRR546799 315514 (TU0313) b0548(ninE) 572144 572314 + 1.00
SRR441587 299118 (TU0375) b0548(ninE) 572144 572314 + 1.00
SRR441586 296182 (TU0357) b0548(ninE) 572144 572314 + 1.00
SRR609953 291991 (TU0317) b0548(ninE) 572144 572314 + 0.80
SRR609952 289481 (TU0308) b0548(ninE) 572144 572314 + 1.00
SRR546814 286968 (TU0313) b0548(ninE) 572144 572314 + 1.00
SRR546813 284341 (TU0312) b0548(ninE) 572144 572314 + 1.00
SRR441585 282019 (TU0272) b0548(ninE) 572144 572314 + 1.00
SRR441584 279129 (TU0362) b0548(ninE) 572144 572314 + 1.00
SRR546812 276418 (TU0367) b0548(ninE) 572144 572314 + 1.00
SRR546811 273659 (TU0329) b0548(ninE) 572144 572314 + 1.00
SRR546810 271327 (TU0282) b0548(ninE) 572144 572314 + 1.00
SRR546809 269416 (TU0210) b0548(ninE) 572144 572314 + 0.52
SRR546808 267056 (TU0293) b0548(ninE) 572144 572314 + 1.00
SRR441583 264719 (TU0279) b0548(ninE) 572144 572314 + 1.00
SRR546807 262593 (TU0266) b0548(ninE) 572144 572314 + 1.00
SRR546806 260011 (TU0314) b0548(ninE) 572144 572314 + 1.00
SRR546805 257560 (TU0298) b0548(ninE) 572144 572314 + 1.00
SRR546804 254922 (TU0325) b0548(ninE) 572144 572314 + 0.98
SRR546803 252528 (TU0296) b0548(ninE) 572144 572314 + 1.00
SRR546801 249863 (TU0323) b0548(ninE) 572144 572314 + 1.00
SRR441582 432960 (TU0314) b0549(ybcO) 572307 572597 + 1.00
SRR441580 424056 (TU0342) b0549(ybcO) 572307 572597 + 1.00
SRR441581 335399 (TU0343) b0549(ybcO) 572307 572597 + 0.97
SRR546802 326036 (TU0321) b0549(ybcO) 572307 572597 + 1.00
SRR546800 318049 (TU0295) b0549(ybcO) 572307 572597 + 1.00
SRR546799 315515 (TU0314) b0549(ybcO) 572307 572597 + 1.00
SRR441587 299119 (TU0376) b0549(ybcO) 572307 572597 + 1.00
SRR441586 296183 (TU0358) b0549(ybcO) 572307 572597 + 1.00
SRR609953 291992 (TU0318) b0549(ybcO) 572307 572597 + 1.00
SRR609952 289482 (TU0309) b0549(ybcO) 572307 572597 + 1.00
SRR546814 286969 (TU0314) b0549(ybcO) 572307 572597 + 1.00
SRR546813 284342 (TU0313) b0549(ybcO) 572307 572597 + 1.00
SRR441585 282020 (TU0273) b0549(ybcO) 572307 572597 + 1.00
SRR441584 279130 (TU0363) b0549(ybcO) 572307 572597 + 1.00
SRR546812 276419 (TU0368) b0549(ybcO) 572307 572597 + 1.00
SRR546811 273660 (TU0330) b0549(ybcO) 572307 572597 + 1.00
SRR546810 271328 (TU0283) b0549(ybcO) 572307 572597 + 1.00
SRR546809 269417 (TU0211) b0549(ybcO) b0550(rusA) b0551(quuD) b0552(insH) b0554(essD) b4509(ylcG) 572307 576836 + 0.84
SRR546808 267057 (TU0294) b0549(ybcO) 572307 572597 + 1.00
SRR441583 264720 (TU0280) b0549(ybcO) 572307 572597 + 1.00
SRR546807 262594 (TU0267) b0549(ybcO) 572307 572597 + 1.00
SRR546806 260012 (TU0315) b0549(ybcO) 572307 572597 + 1.00
SRR546805 257561 (TU0299) b0549(ybcO) 572307 572597 + 1.00
SRR546804 254923 (TU0326) b0549(ybcO) 572307 572597 + 0.98
SRR546803 252529 (TU0297) b0549(ybcO) 572307 572597 + 1.00
SRR546801 249864 (TU0324) b0549(ybcO) 572307 572597 + 1.00
SRR441582 432961 (TU0315) b0550(rusA) 572594 572956 + 1.00
SRR441580 424057 (TU0343) b0550(rusA) 572594 572956 + 1.00
SRR441581 335400 (TU0344) b0550(rusA) 572594 572956 + 0.97
SRR546802 326037 (TU0322) b0550(rusA) 572594 572956 + 1.00
SRR546800 318050 (TU0296) b0550(rusA) 572594 572956 + 1.00
SRR546799 315516 (TU0315) b0550(rusA) 572594 572956 + 1.00
SRR441587 299120 (TU0377) b0550(rusA) 572594 572956 + 1.00
SRR441586 296184 (TU0359) b0550(rusA) 572594 572956 + 1.00
SRR609953 291993 (TU0319) b0550(rusA) 572594 572956 + 1.00
SRR609952 289483 (TU0310) b0550(rusA) 572594 572956 + 1.00
SRR546814 286970 (TU0315) b0550(rusA) 572594 572956 + 1.00
SRR546813 284343 (TU0314) b0550(rusA) 572594 572956 + 1.00
SRR441585 282021 (TU0274) b0550(rusA) 572594 572956 + 1.00
SRR441584 279131 (TU0364) b0550(rusA) 572594 572956 + 1.00
SRR546812 276420 (TU0369) b0550(rusA) 572594 572956 + 1.00
SRR546811 273661 (TU0331) b0550(rusA) 572594 572956 + 1.00
SRR546810 271329 (TU0284) b0550(rusA) 572594 572956 + 1.00
SRR546808 267058 (TU0295) b0550(rusA) 572594 572956 + 1.00
SRR441583 264721 (TU0281) b0550(rusA) 572594 572956 + 1.00
SRR546807 262595 (TU0268) b0550(rusA) 572594 572956 + 1.00
SRR546806 260013 (TU0316) b0550(rusA) 572594 572956 + 1.00
SRR546805 257562 (TU0300) b0550(rusA) 572594 572956 + 1.00
SRR546804 254924 (TU0327) b0550(rusA) 572594 572956 + 1.00
SRR546803 252530 (TU0298) b0550(rusA) 572594 572956 + 1.00
SRR546801 249865 (TU0325) b0550(rusA) 572594 572956 + 1.00
SRR441582 432962 (TU0316) b0551(quuD) b4509(ylcG) 572953 573562 + 0.85
SRR441580 424058 (TU0344) b4509(ylcG) 572953 573093 + 0.97
SRR441581 335401 (TU0345) b4509(ylcG) 572953 573093 + 0.81
SRR546802 326038 (TU0323) b4509(ylcG) 572953 573093 + 0.91
SRR546800 318051 (TU0297) b4509(ylcG) 572953 573093 + 0.87
SRR546799 315517 (TU0316) b4509(ylcG) 572953 573093 + 0.88
SRR441587 299121 (TU0378) b0551(quuD) b0552(insH) b0554(essD) b4509(ylcG) 572953 576836 + 0.80
SRR441586 296185 (TU0360) b4509(ylcG) 572953 573093 + 0.85
SRR609953 291994 (TU0320) b4509(ylcG) 572953 573093 + 1.00
SRR609952 289484 (TU0311) b4509(ylcG) 572953 573093 + 0.94
SRR546814 286971 (TU0316) b4509(ylcG) 572953 573093 + 0.98
SRR546813 284344 (TU0315) b4509(ylcG) 572953 573093 + 0.98
SRR441585 282022 (TU0275) b0551(quuD) b4509(ylcG) 572953 573562 + 0.93
SRR441584 279132 (TU0365) b4509(ylcG) 572953 573093 + 0.93
SRR546812 276421 (TU0370) b4509(ylcG) 572953 573093 + 0.82
SRR546811 273662 (TU0332) b4509(ylcG) 572953 573093 + 1.00
SRR546810 271330 (TU0285) b4509(ylcG) 572953 573093 + 0.79
SRR546808 267059 (TU0296) b4509(ylcG) 572953 573093 + 0.93
SRR441583 264722 (TU0282) b4509(ylcG) 572953 573093 + 1.00
SRR546807 262596 (TU0269) b4509(ylcG) 572953 573093 + 0.89
SRR546806 260014 (TU0317) b4509(ylcG) 572953 573093 + 0.85
SRR546805 257563 (TU0301) b4509(ylcG) 572953 573093 + 1.00
SRR546804 254925 (TU0328) b4509(ylcG) 572953 573093 + 0.86
SRR546803 252531 (TU0299) b4509(ylcG) 572953 573093 + 0.95
SRR546801 249866 (TU0326) b4509(ylcG) 572953 573093 + 0.79

Conserve operons

Operon Size Similarity Species NC
3115 6 1 Escherichia coli str. K-12 substr. MG1655 NC_000913
401130 5 0.833 Escherichia coli str. K-12 substr. DH10B NC_010473
566438 6 1 Escherichia coli BW2952 NC_012759
588416 6 1 Escherichia coli 'BL21-Gold(DE3)pLysS AG' NC_012947
590350 5 0.833 Escherichia coli BL21(DE3) NC_012971
19317 6 0.714 Escherichia coli O157:H7 str. Sakai NC_002695