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Basic information
Operon ID 3248
Size 2
Protein gene number 2
RNA gene number 0
Similar operon number 22
Species nameEscherichia coli str. K-12 substr. MG1655
NC name NC_000913
NC descriptionEscherichia coli str. K-12 substr. MG1655 chromosome, complete genome.
Reference PubMed: 19881496
Genes
GIStartEndStrand GeneSynonymCOGProduct
94541107 1333184 1333312 + ymiA b4522 - hypothetical protein
145698251 1333315 1333482 + yciX b4523 - hypothetical protein
Terminator

TU (transcription unit)

Source ID Genes Start End Strand Accuracy
SRR441582 433367 (TU0721) b4522(ymiA) 1333184 1333312 + 1.00
SRR441580 424519 (TU0805) b4523(yciX) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1282(yciH) b4522(ymiA) 1324876 1341008 + 0.89
SRR441581 335844 (TU0788) b4523(yciX) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b1278(pgpB) b4522(ymiA) 1329072 1338118 + 0.75
SRR546802 326439 (TU0724) b4522(ymiA) 1333184 1333312 + 0.77
SRR546800 318431 (TU0677) b4523(yciX) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b4522(ymiA) 1328441 1337184 - 0.91
SRR546800 318430 (TU0676) b4523(yciX) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b4522(ymiA) 1327356 1333482 + 0.80
SRR546799 315929 (TU0728) b4523(yciX) b1266(yciV) b1268(yciQ) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1267(yciO) b4522(ymiA) 1321244 1333482 + 0.81
SRR609955 302222 (TU0525) b4523(yciX) b1275(cysB) b1276(acnA) b4522(ymiA) 1331879 1336530 + 0.90
SRR441587 299600 (TU0857) b1275(cysB) b4522(ymiA) 1331879 1333312 + 0.93
SRR441586 296650 (TU0825) b4522(ymiA) 1333184 1333312 + 1.00
SRR609954 294612 (TU0511) b4523(yciX) b1274(topA) b1275(cysB) b1276(acnA) b4522(ymiA) 1329072 1336530 + 0.98
SRR609953 292403 (TU0729) b4523(yciX) b1276(acnA) b4522(ymiA) 1333184 1336530 + 0.87
SRR609952 289895 (TU0722) b4523(yciX) b4522(ymiA) 1333184 1333482 + 0.83
SRR546814 287373 (TU0718) b4523(yciX) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1282(yciH) b4522(ymiA) 1333184 1341008 + 0.88
SRR546813 284764 (TU0735) b4523(yciX) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1282(yciH) b4522(ymiA) 1327356 1341008 + 0.93
SRR441585 282432 (TU0685) b4523(yciX) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1282(yciH) b4522(ymiA) 1333184 1341008 + 1.00
SRR441584 279626 (TU0859) b4522(ymiA) 1333184 1333312 + 1.00
SRR546812 276858 (TU0807) b4523(yciX) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b4522(ymiA) 1328441 1337184 - 0.92
SRR546812 276856 (TU0805) b4523(yciX) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b4522(ymiA) 1324876 1340682 + 0.99
SRR546811 274088 (TU0758) b4523(yciX) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b4522(ymiA) 1333184 1339751 + 0.87
SRR546811 274087 (TU0757) b4523(yciX) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b4522(ymiA) 1328441 1337184 - 0.87
SRR546810 271699 (TU0654) b4523(yciX) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b4522(ymiA) 1325791 1337184 - 0.86
SRR546810 271698 (TU0653) b4523(yciX) b1268(yciQ) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b4522(ymiA) 1322770 1333482 + 0.90
SRR546809 269730 (TU0524) b4523(yciX) b1266(yciV) b1268(yciQ) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1267(yciO) b4522(ymiA) 1321244 1333482 + 0.94
SRR546808 267429 (TU0666) b4523(yciX) b1266(yciV) b1268(yciQ) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1267(yciO) b4522(ymiA) 1321244 1340682 + 0.94
SRR441583 265122 (TU0682) b4523(yciX) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b4522(ymiA) 1333184 1339751 + 0.93
SRR546807 262946 (TU0619) b4523(yciX) b4522(ymiA) 1333184 1333482 + 0.81
SRR546806 260424 (TU0727) b4523(yciX) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1282(yciH) b4522(ymiA) 1324876 1341008 + 0.91
SRR546805 257962 (TU0700) b4523(yciX) b4522(ymiA) 1333184 1333482 + 1.00
SRR546804 255369 (TU0772) b4523(yciX) b1269(rluB) b1270(btuR) b1271(yciK) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b1276(acnA) b4522(ymiA) 1324876 1336530 + 0.83
SRR546803 252913 (TU0681) b4523(yciX) b1276(acnA) b1277(ribA) b1278(pgpB) b1279(yciS) b1280(yciM) b1281(pyrF) b1282(yciH) b4522(ymiA) 1333184 1341008 + 0.93
SRR546801 250296 (TU0756) b1272(sohB) b1273(yciN) b1274(topA) b1275(cysB) b4522(ymiA) 1327356 1333312 + 0.86
SRR441582 433368 (TU0722) b4523(yciX) 1333315 1333482 + 1.00
SRR546802 326440 (TU0725) b4523(yciX) 1333315 1333482 + 0.70
SRR441587 299601 (TU0858) b4523(yciX) 1333315 1333482 + 0.78
SRR441586 296651 (TU0826) b4523(yciX) 1333315 1333482 + 0.90
SRR441584 279627 (TU0860) b4523(yciX) 1333315 1333482 + 1.00
SRR546801 250297 (TU0757) b4523(yciX) 1333315 1333482 + 0.76

Conserve operons

Operon Size Similarity Species NC
3248 2 1 Escherichia coli str. K-12 substr. MG1655 NC_000913
73101 2 1 Escherichia coli CFT073 NC_004431
205936 2 1 Escherichia coli 536 NC_008253
296558 2 1 Enterobacter sp. 638 NC_009436
352757 2 1 Escherichia coli E24377A NC_009801
400231 2 1 Escherichia coli ATCC 8739 NC_010468
401288 2 1 Escherichia coli str. K-12 substr. DH10B NC_010473
495251 2 1 Escherichia coli IAI1 NC_011741
497357 2 1 Escherichia coli ED1a NC_011745
498402 2 1 Escherichia coli 55989 NC_011748
499440 2 1 Escherichia coli IAI39 NC_011750
566568 2 1 Escherichia coli BW2952 NC_012759
580796 2 1 Escherichia coli BL21(DE3) NC_012892
588274 2 1 Escherichia coli 'BL21-Gold(DE3)pLysS AG' NC_012947
695513 2 1 Enterobacter cloacae subsp. cloacae ATCC 13047 NC_014121
755965 2 1 Enterobacter cloacae SCF1 NC_014618
919475 2 1 Enterobacter asburiae LF7a NC_015968
1074145 2 1 Escherichia coli DH1 NC_017625
1074900 2 1 Escherichia coli IHE3034 NC_017628
1077981 2 1 Escherichia coli str. 'clone D i2' NC_017651
1078988 2 1 Escherichia coli str. 'clone D i14' NC_017652
15515 2 1 Escherichia coli O157:H7 str. EDL933 NC_002655
68955 2 1 Shigella flexneri 2a str. 301 NC_004337