Basic information
Operon ID | 498235 |
Size | 4 |
Protein gene number | 4 |
RNA gene number | 0 |
Similar operon number | 5 |
Species name | Escherichia coli 55989 |
NC name | NC_011748 |
NC description | Escherichia coli 55989, complete genome. |
Reference | No available reference |
Genes
GI | Start | End | Strand | Gene | Synonym | COG | Product |
---|---|---|---|---|---|---|---|
218693994 | 586779 | 587471 | + | sfmC | EC55989_0545 | - | pilin chaperone, periplasmic |
218693995 | 587502 | 590111 | + | sfmD | EC55989_0546 | - | putative outer membrane export usher protein |
218693996 | 590154 | 591131 | + | sfmH | EC55989_0547 | - | putative fimbrial-like adhesin protein |
218693997 | 591142 | 591657 | + | sfmF | EC55989_0548 | - | putative fimbrial protein |
Terminator
Gi | Gene | Synonym | Start | End | Hairpin | Tail | Sequence | Confidence |
---|---|---|---|---|---|---|---|---|
218693995 | sfmD | EC55989_0546 | 590131 | 590144 | -3.9 | -3.63515 | AATTATCAATGAAGA TAATC TGCA GATTA TTATTGGCGATGGAA | 53 |
218693997 | sfmF | EC55989_0548 | 592070 | 592084 | -2.1 | -4.08216 | CTTTCACTGTGCTCT GGATT TGTTT GATCC TTTTCAGGAAGGTAA | 56 |
TU (transcription unit)
Source | ID | Genes | Start | End | Strand | Accuracy |
---|
Conserve operons
Operon | Size | Similarity | Species | NC |
---|---|---|---|---|
498235 | 4 | 1 | Escherichia coli 55989 | NC_011748 |
15210 | 4 | 1 | Escherichia coli O157:H7 str. EDL933 | NC_002655 |
19123 | 4 | 1 | Escherichia coli O157:H7 str. Sakai | NC_002695 |
46341 | 4 | 1 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | NC_003197 |
47219 | 4 | 1 | Salmonella enterica subsp. enterica serovar Typhi str. CT18 | NC_003198 |
80117 | 4 | 1 | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 | NC_004631 |